Add taxa_names as last column in phyloseq tax_table

The taxa names in your phyloseq may specify a further unique classification of your taxa, e.g. ASVs, that is not otherwise represented in the tax_table itself. This function fixes that, and allows you to include this level in taxatree_plots for example.

Usage

tax_names2rank(data, colname = "unique")

Arguments

data

phyloseq object, or psExtra or tax_table (taxonomyTable)

colname

name of new rank to add at right side of tax_table

Value

same class object as passed in to data