Convert old format "ps_extra" objects to new "psExtra" objects

Source: R/ps_extra.R

This will only be necessary if you have saved old format "ps_extra" objects generated by an old microViz version (< 0.10.0), and you cannot or do not want to regenerate these old format objects from your original phyloseq object.

upgrade_ps_extra_to_psExtra(ps_extra)

Arguments

ps_extra

an old format "ps_extra" object, as generated by old microViz versions (< 0.10.0)

Value

new format "psExtra" S4 object

Examples

# read your old saved 'ps_extra' object that you want to keep using
# oldObject <- readRDS("old-object-path.rds")
# newObject <- upgrade_ps_extra_to_psExtra(oldObject)
# continue with your next analysis or plotting steps...